BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F12SP1|AL429613
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1607 485 e-137
>3x_Contig1607
Length = 10159
Score = 485 bits (229), Expect = e-137
Identities = 248/263 (94%)
Strand = Plus / Minus
Query: 58 gtaaacatgagtacccccaaacaagaaaacatcactatcatccgtaataacaccatctac 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10159 gtaaacatgagtacccccaaacaagaaaacatcactatcatccgtaataacaccatctac 10100
Query: 118 tagtttcaactgtaataaagttgcacattgagcttctgcttccattggtgccgtgatgta 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10099 tagtttcaactgtaataaagttgcacattgagcttctgcttccattggtgccgtgatgta 10040
Query: 178 cggtataccaaaccgtgawaaaagactctgaatttcatgaatcawctctatggwgacttc 237
|||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 10039 cggtataccaaaccgtgataaaagactctgaatttcatgaatcatctctatggtgacttc 9980
Query: 238 atccgcatccctctwatccttcttctgctgcwcaaaragttcatcttmaaaaaatgmagt 297
|||||||||||||| |||||||||||||||| |||| |||||||||| ||||||| |||
Sbjct: 9979 atccgcatccctcttatccttcttctgctgctcaaagagttcatcttctaaaaatgcagt 9920
Query: 298 gtwmammaagtatggattmaaag 320
|| | |||| |||||| ||||
Sbjct: 9919 gttcaccaagtttggattcaaag 9897
Score = 479 bits (226), Expect = e-135
Identities = 226/226 (100%)
Strand = Plus / Minus
Query: 630 tctatcagttctggatggtgatagccaattctatttttaaccagctcctgtgcagcttca 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9588 tctatcagttctggatggtgatagccaattctatttttaaccagctcctgtgcagcttca 9529
Query: 690 ccagtcaagatcccgtactgatcttcaggtcttacatcactcttctccctatctgcgacg 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9528 ccagtcaagatcccgtactgatcttcaggtcttacatcactcttctccctatctgcgacg 9469
Query: 750 aaagagctgctcgaatatgggtttctattggcggtggaggagaaccacgctggaacttcc 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9468 aaagagctgctcgaatatgggtttctattggcggtggaggagaaccacgctggaacttcc 9409
Query: 810 tgagcctgtttctcttgagtatcagttgatgtcggagcagtttccc 855
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9408 tgagcctgtttctcttgagtatcagttgatgtcggagcagtttccc 9363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.725 1.38
Gapped
Lambda K H
1.47 0.725 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3915
Number of Sequences: 1807
Number of extensions: 3915
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 15
effective length of query: 842
effective length of database: 10,331,446
effective search space: 8699077532
effective search space used: 8699077532
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.6 bits)
S1: 11 (23.8 bits)
S2: 47 (100.0 bits)